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| Tree * | copy () |
| | Create an identical copy of the genotype object.
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| void | growBuild (PrimitiveSetP primitiveSet) |
| | Build tree with grow method.
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| void | fullBuild (PrimitiveSetP primitiveSet) |
| | Build tree with full method.
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| void | update () |
| | Calculate depth and subtree sizes of each node in the tree.
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| void | execute (void *) |
| | Execute current tree.
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| void | addNode (Node *node) |
| void | addNode (NodeP node) |
| void | setTerminalValue (std::string, void *) |
| | Set a terminal's value.
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| void | getTerminalValue (std::string, void *) |
| | Retrieve a terminal's value.
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| void | write (XMLNode &) |
| | Write genotype data to XMLNode.
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| void | read (XMLNode &) |
| | Read genotype data from XMLNode.
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| void | registerParameters (StateP) |
| | Register genotype's parameters (called before Genotype::initialize).
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| bool | initialize (StateP state) |
| | Initialize a genotype object (read parameters, perform sanity check, build data).
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| std::vector< MutationOpP > | getMutationOp () |
| | Create and return a vector of mutation operators.
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| std::vector< CrossoverOpP > | getCrossoverOp () |
| | Create and return a vector of crossover operators.
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| bool | addFunction (PrimitiveP) |
| | Add user defined function primitive. Must be called prior to initialization (no impact otherwise).
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| bool | addTerminal (PrimitiveP) |
| | Add user defined terminal primitive. Must be called prior to initialization (no impact otherwise).
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| uint | getMaxDepth () |
| uint | getMinDepth () |
| uint | getStartDepth () |
| bool | registerParameter (StateP state, std::string name, voidP value, enum ECF::type T, std::string description="") |
| | Register a single parameter.
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| voidP | getParameterValue (StateP state, std::string name) |
| | Read single parameter value from Registry.
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| bool | setParameterValue (StateP state, std::string name, voidP value) |
| | Write single parameter value to Registry.
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| bool | isParameterDefined (StateP state, std::string name) |
| | Check if parameter is defined in the configuration.
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| virtual uint | getGenomeSize () |
| std::string | getName () |
| | Return genotype's name (each genotype is uniquely identified with its name).
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| uint | getGenotypeId () |
| | Return this genotype's index in individual structure.
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| void | setGenotypeId (uint id) |
| | Set genotype index in an individual.
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| std::string | toString () |
| | Output genotype to string.
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Tree class - implements genotype as a tree.
Tree inherits a vector of Node objects. Each node points to a Primitive object. Nodes in tree are aligned in a prefix notation. Some primitives are shared among all the trees, but some (such as ERC primitives) belong to a single Tree.
Definition at line 28 of file Tree_c.h.
1.18.0