Binary class - implements genotype as a vector of binary coded real values with variable interval and precision. More...

#include <Binary.h>

Inheritance diagram for Binary::Binary:

Public Member Functions
uint	getNumBits ()
	Return number of bits used in a single dimension in real domain. More...

bool	initialize (StateP state)
	Initialize a genotype object (read parameters, perform sanity check, build data) More...

void	registerParameters (StateP state)
	Register genotype's parameters (called before Genotype::initialize) More...

bool	update (void)
	Update genotype after genetic material change via genetic operators. More...

Binary *	copy ()
	Create an identical copy of the genotype object. More...

std::vector< CrossoverOpP >	getCrossoverOp ()
	Create and return a vector of crossover operators. More...

std::vector< MutationOpP >	getMutationOp ()
	Create and return a vector of mutation operators. More...

void	write (XMLNode &xBinary)
	Write genotype data to XMLNode. More...

void	read (XMLNode &xBinary)
	Read genotype data from XMLNode. More...

Public Member Functions inherited from RealValueGenotype
double	getLBound ()
	return lower bound of the defined interval More...

double	getUBound ()
	return upper bound of the defined interval More...

virtual bool	update (void)
	Update genotype after genetic material change via genetic operators. More...

Public Member Functions inherited from Genotype
virtual bool	initialize (StateP state)=0
	Initialize a genotype object (read parameters, perform sanity check, build data) More...

virtual Genotype *	copy ()=0
	Create an identical copy of the genotype object. More...

virtual std::vector< CrossoverOpP >	getCrossoverOp ()
	Create and return a vector of crossover operators. More...

virtual std::vector< MutationOpP >	getMutationOp ()
	Create and return a vector of mutation operators. More...

virtual void	registerParameters (StateP)
	Register genotype's parameters (called before Genotype::initialize) More...

bool	registerParameter (StateP state, std::string name, voidP value, enum ECF::type T, std::string description="")
	Register a single parameter. More...

voidP	getParameterValue (StateP state, std::string name)
	Read single parameter value from Registry. More...

bool	setParameterValue (StateP state, std::string name, voidP value)
	Write single parameter value to Registry. More...

bool	isParameterDefined (StateP state, std::string name)
	Check if parameter is defined in the configuration. More...

virtual void	read (XMLNode &)=0
	Read genotype data from XMLNode. More...

virtual void	write (XMLNode &)=0
	Write genotype data to XMLNode. More...

virtual uint	getGenomeSize ()

std::string	getName ()
	Return genotype's name (each genotype is uniquely identified with its name). More...

uint	getGenotypeId ()
	Return this genotype's index in individual structure. More...

void	setGenotypeId (uint id)
	Set genotype index in an individual. More...

std::string	toString ()
	Output genotype to string. More...

Public Attributes
std::vector< long int >	decValue
	integer values of bit representation More...

std::vector< v_bool >	variables
	vector of bit vectors More...

Public Attributes inherited from RealValueGenotype
std::vector< double >	realValue
	vector of floating point values More...

Protected Types
typedef std::vector< bool >	v_bool

Protected Member Functions
double	logbase (double a, double base)

double	round (double, int)

Protected Attributes
uint	nDecimal_
	number of digits after the decimal point More...

uint	nBits_
	number of bits for a single dimension More...

long	potention_

bool	bRounding_
	use rounding with 'precision' digits on real values in the chromosome More...

v_bool	vBool_
	temporary bool vector More...

Protected Attributes inherited from RealValueGenotype
double	minValue_
	lower bound More...

double	maxValue_
	upper bound More...

uint	nDimension_
	dimensionality More...

Protected Attributes inherited from Genotype
std::string	name_
	genotype's name More...

uint	genotypeId_
	this genotype's unique index in individual structure More...

Friends
class	BinaryMutSimple

Detailed Description

Binary class - implements genotype as a vector of binary coded real values with variable interval and precision.

Binary genotype parameters are (the first 3 are inherited from RealValueGenoptype):

lbound: lower bound of represented real value
ubound: upper bound of represented real value
dimension: number of distinct real values, each coded with previous 3 parameters
precision: desired number of digits (after the decimal point) to be represented
rounding: whether the represented real value is rounded to 'precision' digits (false by default)

Definition at line 38 of file Binary.h.

Member Typedef Documentation

◆ v_bool

typedef std::vector<bool> Binary::Binary::v_bool

protected

Definition at line 45 of file Binary.h.

Constructor & Destructor Documentation

◆ Binary()

Binary::Binary::Binary ( )

inline

Definition at line 55 of file Binary.h.

Member Function Documentation

◆ copy()

Binary * Binary::Binary::copy ( )

inlinevirtual

Create an identical copy of the genotype object.

Implements Genotype.

Definition at line 69 of file Binary.h.

◆ getCrossoverOp()

std::vector< CrossoverOpP > Binary::Binary::getCrossoverOp ( )

inlinevirtual

Create and return a vector of crossover operators.

Reimplemented from Genotype.

Definition at line 75 of file Binary.h.

◆ getMutationOp()

std::vector< MutationOpP > Binary::Binary::getMutationOp ( )

inlinevirtual

Create and return a vector of mutation operators.

Reimplemented from Genotype.

Definition at line 92 of file Binary.h.

◆ getNumBits()

uint Binary::Binary::getNumBits ( )

inline

Return number of bits used in a single dimension in real domain.

Definition at line 59 of file Binary.h.

◆ initialize()

bool Binary::Binary::initialize ( StateP state )

virtual

Initialize a genotype object (read parameters, perform sanity check, build data)

Implements Genotype.

Definition at line 38 of file Binary.cpp.

◆ logbase()

double Binary::Binary::logbase	(	double	a,
		double	base
	)

protected

Definition at line 9 of file Binary.cpp.

◆ read()

void Binary::Binary::read ( XMLNode & )

virtual

Read genotype data from XMLNode.

Implements Genotype.

Definition at line 143 of file Binary.cpp.

◆ registerParameters()

void Binary::Binary::registerParameters ( StateP )

virtual

Register genotype's parameters (called before Genotype::initialize)

Reimplemented from Genotype.

Definition at line 23 of file Binary.cpp.

◆ round()

double Binary::Binary::round	(	double	val,
		int	decimals
	)

protected

Definition at line 15 of file Binary.cpp.

◆ update()

bool Binary::Binary::update ( void )

virtual

Update genotype after genetic material change via genetic operators.

Reimplemented from RealValueGenotype.

Definition at line 108 of file Binary.cpp.

◆ write()

void Binary::Binary::write ( XMLNode & )

virtual

Write genotype data to XMLNode.

Implements Genotype.

Definition at line 129 of file Binary.cpp.

Friends And Related Function Documentation

◆ BinaryMutSimple

friend class BinaryMutSimple

friend

Definition at line 39 of file Binary.h.

Member Data Documentation

◆ bRounding_

bool Binary::Binary::bRounding_

protected

use rounding with 'precision' digits on real values in the chromosome

Definition at line 44 of file Binary.h.

◆ decValue

std::vector<long int> Binary::Binary::decValue

integer values of bit representation

Definition at line 52 of file Binary.h.

◆ nBits_

uint Binary::Binary::nBits_

protected

number of bits for a single dimension

Definition at line 42 of file Binary.h.

◆ nDecimal_

uint Binary::Binary::nDecimal_

protected

number of digits after the decimal point

Definition at line 41 of file Binary.h.

◆ potention_

long Binary::Binary::potention_

protected

Definition at line 43 of file Binary.h.

◆ variables

std::vector<v_bool> Binary::Binary::variables

vector of bit vectors

Definition at line 53 of file Binary.h.

◆ vBool_

v_bool Binary::Binary::vBool_

protected

temporary bool vector

Definition at line 46 of file Binary.h.

The documentation for this class was generated from the following files:

D:/Projekt/ECF_trunk/ECF/binary/Binary.h
D:/Projekt/ECF_trunk/ECF/binary/Binary.cpp

Public Member Functions

Public Attributes

Protected Types

Protected Member Functions

Protected Attributes

Friends

Detailed Description

Member Typedef Documentation

◆ v_bool

Constructor & Destructor Documentation

◆ Binary()

Member Function Documentation

◆ copy()

◆ getCrossoverOp()

◆ getMutationOp()

◆ getNumBits()

◆ initialize()

◆ logbase()

◆ read()

◆ registerParameters()

◆ round()

◆ update()

◆ write()

Friends And Related Function Documentation

◆ BinaryMutSimple

Member Data Documentation

◆ bRounding_

◆ decValue

◆ nBits_

◆ nDecimal_

◆ potention_

◆ variables

◆ vBool_